Basic Information
Locus ID:
Ftri9G20072
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Possibly involved in carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 85617365 | 85621097 | + | Ftri9G20072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 52,665.04 Da | 35.23 | 94.56 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 359 | 430 | 5.3E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 24 | 342 | 8.1E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 24 | 341 | 4.08E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 457 | 4.5E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 23 | 346 | 8.5E-111 | - |
| SMART | SM00768 | X8_cls | 358 | 443 | 1.7E-44 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 258 | 271 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021976396.1 | glucan endo-1,3-beta-glucosidase 3 isoform X1 [Helianthus annuus] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251U263 | Putative glycoside hydrolase family 17, X8 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0212411 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology