Basic Information
Locus ID:
Ftri9G16570
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 9553096 | 9562873 | - | Ftri9G16570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 102,285.88 Da | 41.33 | 97.88 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 133 | 193 | 6.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 65 | 8.3E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 607 | 861 | 5.8E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 252 | 311 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 894 | 1.94E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 375 | 4.59E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 573 | 667 | 2.7E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 668 | 892 | 2.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 270 | 9.2E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 271 | 392 | 2.2E-13 | IPR032675 |
| SMART | SM00220 | serkin_6 | 603 | 868 | 1.1E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 132 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 603 | 868 | 33.191593 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 714 | 726 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 905 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043635695.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Erigeron canadensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251U7P1 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0230831 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology