Basic Information
Locus ID:
Ftri9G15865
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Tyr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 85219357 | 85221391 | - | Ftri9G15865 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 54,963.36 Da | 43.39 | 86.43 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 284 | 1.7E-32 | IPR001245 |
| Pfam | PF01582 | TIR domain | 329 | 458 | 3.3E-29 | IPR000157 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 284 | 7.28E-59 | IPR011009 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 324 | 467 | 2.09E-30 | IPR035897 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 305 | 2.2E-42 | - |
| Gene3D | G3DSA:3.40.50.10140 | - | 323 | 480 | 2.7E-47 | IPR035897 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 100 | 2.2E-30 | - |
| SMART | SM00255 | till_3 | 329 | 464 | 2.0E-31 | IPR000157 |
| SMART | SM00220 | serkin_6 | 25 | 288 | 2.8E-15 | IPR000719 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 328 | 463 | 28.021309 | IPR000157 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 288 | 29.714628 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 144 | 156 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_021974413.1 | putative receptor-like protein kinase At5g39000 [Helianthus annuus] | 0 |
| O22187 | Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana OX=3702 GN=At2g23200 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251U4Z8 | Putative toll/interleukin-1 receptor (TIR) domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0211481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 8 | Ftri1G03248, Ftri1G09039, Ftri1G17660, Ftri1G29281 ... |