Basic Information
Locus ID:
Ftri9G14744
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 6150246 | 6150982 | + | Ftri9G14744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.61 | 18,962.91 Da | 43.62 | 77.94 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00097 | Zinc finger, C3HC4 type (RING finger) | 143 | 169 | 4.5E-7 | IPR018957 |
| SUPERFAMILY | SSF57850 | RING/U-box | 142 | 176 | 3.74E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 179 | 1.7E-8 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 144 | 170 | 8.830534 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 135 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_043636690.1 | uncharacterized protein LOC122607729 [Erigeron canadensis] | 0 |
| TrEMBL | A0A5N6PCV1 | RING-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_11272 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology