Basic Information
Locus ID:
Ftri9G08131
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 82838685 | 82842791 | - | Ftri9G08131 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 122,928.78 Da | 42.81 | 68.19 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00855 | PWWP domain | 659 | 695 | 8.2E-8 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 655 | 744 | 8.42E-13 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 650 | 698 | 5.9E-12 | - |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 661 | 679 | 10.333667 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 199 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_043629104.1 | uncharacterized protein LOC122600453 [Erigeron canadensis] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251T1Z2 | PWWP domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0370341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology