Basic Information
Locus ID:
Ftri9G07677
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
cellular response to DNA damage stimulus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 85218443 | 85219258 | - | Ftri9G07677 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 29,937.60 Da | 28.72 | 97.05 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 26 | 242 | 2.7E-26 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 14 | 255 | 1.46E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 2 | 174 | 2.6E-32 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 177 | 266 | 2.5E-10 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 119 | 133 | 1.2E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 44 | 59 | 1.2E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 211 | 225 | 1.2E-10 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G36930.3 | - | 0 |
| RefSeq | XP_021974396.1 | TMV resistance protein N-like [Helianthus annuus] | 0 |
| A0A290U7C4 | Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6PS82 | BHLH domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_07192 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 8 | Ftri1G03248, Ftri1G09039, Ftri1G17660, Ftri1G29281 ... |