Basic Information
Locus ID:
Ftri9G06641
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2690259 | 2691452 | - | Ftri9G06641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 43,180.35 Da | 36.44 | 106.25 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 148 | 161 | 0.29 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 4.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 369 | 3.32E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 194 | 1.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 377 | 3.6E-26 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 149 | 162 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 239 | 252 | 1.5E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_022010642.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Helianthus annuus] | 0 |
| TrEMBL | A0A251S582 | Putative leucine-rich repeat protein, plant-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0466531 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology