Basic Information
Locus ID:
Ftri9G06442
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 84053846 | 84055817 | - | Ftri9G06442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 42,127.33 Da | 52.78 | 73.38 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 317 | 356 | 3.7E-8 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 114 | 235 | 3.66E-12 | - |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 312 | 361 | 3.31E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 45 | 112 | 1.7E-7 | IPR036047 |
| Gene3D | G3DSA:6.10.140.2220 | - | 305 | 361 | 7.4E-11 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 108 | 247 | 2.1E-17 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 314 | 356 | 10.980436 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 391 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_021976018.1 | F-box protein At1g67340 [Helianthus annuus] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LR20 | MYND-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_37400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology