Basic Information
Locus ID:
Ftri9G05850
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 89387128 | 89391471 | - | Ftri9G05850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 84,176.88 Da | 52.07 | 77.66 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 463 | 724 | 1.00108E-86 | - |
| CDD | cd01989 | STK_N | 28 | 166 | 1.71239E-59 | - |
| Pfam | PF00582 | Universal stress protein family | 29 | 158 | 3.8E-12 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 457 | 711 | 8.9E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 29 | 166 | 1.17E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 436 | 717 | 2.19E-66 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 28 | 166 | 2.2E-14 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 426 | 529 | 1.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 740 | 1.4E-46 | - |
| SMART | SM00220 | serkin_6 | 457 | 718 | 1.9E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 457 | 721 | 34.873539 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 575 | 587 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 391 | - | - |
| Coils | Coil | Coil | 325 | 345 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16760.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_043618577.1 | U-box domain-containing protein 35-like [Erigeron canadensis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251U493 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0217961 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology