Basic Information
Locus ID:
Ftri9G05496
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
CPK13
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 452649 | 458956 | - | Ftri9G05496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 62,438.56 Da | 40.80 | 82.48 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 454 | 516 | 1.74532E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 76 | 334 | 1.80468E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 77 | 335 | 3.9E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 381 | 441 | 4.8E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 453 | 516 | 2.1E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 372 | 529 | 8.92E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 75 | 341 | 2.56E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 344 | 519 | 1.1E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 343 | 5.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 64 | 158 | 8.2E-25 | - |
| SMART | SM00054 | efh_1 | 382 | 410 | 1.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 454 | 482 | 0.0078 | IPR002048 |
| SMART | SM00054 | efh_1 | 418 | 446 | 6.1 | IPR002048 |
| SMART | SM00054 | efh_1 | 490 | 518 | 1.7E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 77 | 335 | 7.3E-94 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 450 | 485 | 13.564962 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 414 | 449 | 8.515894 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 335 | 46.562355 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 378 | 413 | 15.573431 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 486 | 521 | 14.122869 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 391 | 403 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 106 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 463 | 475 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 197 | 209 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 499 | 511 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 57 | - | - |
| Coils | Coil | Coil | 400 | 420 | - | - |
| Coils | Coil | Coil | 26 | 57 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_023734821.1 | calcium-dependent protein kinase 13 [Lactuca sativa] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A109QM05 | Putative calcium-dependent protein kinase 13 OS=Taraxacum kok-saghyz OX=333970 GN=CPK13 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology