Basic Information
Locus ID:
Ftri9G03836
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 13806850 | 13809761 | - | Ftri9G03836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 67,261.82 Da | 36.19 | 84.75 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 308 | 437 | 7.56781E-31 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 318 | 438 | 7.3E-19 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 22 | 283 | 2.6E-45 | IPR000719 |
| Pfam | PF01419 | Jacalin-like lectin domain | 468 | 592 | 1.7E-7 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 443 | 592 | 1.13E-20 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 305 | 438 | 3.92E-26 | IPR036404 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 285 | 1.48E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 298 | 1.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 97 | 5.7E-33 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 439 | 592 | 1.3E-26 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 301 | 438 | 4.7E-33 | IPR036404 |
| SMART | SM00220 | serkin_6 | 21 | 289 | 8.0E-31 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 308 | 438 | 2.4E-14 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 294 | 438 | 30.208344 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 442 | 592 | 19.553574 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 289 | 34.887672 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
| Coils | Coil | Coil | 42 | 62 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04690.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_022020678.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Helianthus annuus] | 0 |
| Q9SR05 | Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana OX=3702 GN=ANX1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RTU6 | Putative jacalin-like lectin domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0564441 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 5 | Ftri17G09392, Ftri17G15571, Ftri17G24526, Ftri6G03856 ... |