Basic Information
Locus ID:
Ftri9G02630
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 86899126 | 86902555 | + | Ftri9G02630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 67,028.61 Da | 36.32 | 96.57 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 301 | 554 | 1.0E-34 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 117 | 177 | 4.5E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 2.8E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 191 | 3.95E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 558 | 7.69E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 208 | 3.9E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 577 | 6.4E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 7.8E-37 | - |
| SMART | SM00220 | serkin_6 | 299 | 557 | 9.4E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 567 | 29.149267 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 118 | 141 | 7.419328 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 419 | 431 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 119 | 132 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 164 | 177 | 1.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 569 | 583 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_021976611.1 | protein NSP-INTERACTING KINASE 2 [Helianthus annuus] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U2S5 | Putative NSP-interacting kinase 2 OS=Helianthus annuus OX=4232 GN=NIK2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology