Basic Information
Locus ID:
Ftri9G00420
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 77632835 | 77642848 | - | Ftri9G00420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 78,707.90 Da | 37.28 | 87.21 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 316 | 7.44345E-91 | - |
| CDD | cd14066 | STKc_IRAK | 392 | 658 | 4.84353E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 45 | 312 | 5.1E-47 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 659 | 3.4E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 315 | 3.78E-76 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 661 | 6.61E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 118 | 2.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 340 | 6.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 464 | 3.4E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 683 | 2.8E-60 | - |
| SMART | SM00220 | serkin_6 | 386 | 664 | 8.5E-29 | IPR000719 |
| SMART | SM00220 | serkin_6 | 40 | 313 | 7.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 664 | 36.074928 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 318 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 510 | 522 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 392 | 417 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 71 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 164 | 176 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_023755156.1 | nodulation receptor kinase [Lactuca sativa] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6K8E8 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_7X62960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G01892, Ag1G01893, Ag1G01894, Ag1G01896, Ag1G01897 ... |
| Asteraceae | Flaveria trinervia | 8 | Ftri6G13736, Ftri7G15621, Ftri8G01115, Ftri8G26217 ... |