Basic Information
Locus ID:
Ftri9G00225
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 72839693 | 72846045 | - | Ftri9G00225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 105,301.79 Da | 34.72 | 95.59 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 603 | 868 | 1.81042E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 600 | 865 | 1.4E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 1.8E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 327 | 8.67E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 583 | 883 | 4.65E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 240 | 367 | 1.2E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 673 | 880 | 3.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 135 | 6.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 572 | 672 | 2.0E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 239 | 2.9E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 597 | 868 | 3.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 869 | 39.028934 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 625 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 717 | 729 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_035845026.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Helianthus annuus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1P6T1 | Serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA043800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology