Basic Information
Locus ID:
Ftri8G26845
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Hippocampus abundant transcript 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 71116408 | 71125682 | - | Ftri8G26845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 38,917.61 Da | 37.94 | 113.49 | 0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 1 | 351 | 7.33775E-42 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 2 | 325 | 4.9E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 2 | 350 | 4.32E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 1 | 352 | 5.0E-38 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 355 | 11.292418 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021997588.1 | tetracycline resistance protein, class H [Helianthus annuus] | 0 |
| P39843 | Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=blt PE=3 SV=1 | 0 | |
| TrEMBL | A0A251T2D2 | Putative major facilitator superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0366661 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology