Basic Information
Locus ID:
Ftri8G26217
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase At5g24010
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 6415525 | 6421211 | - | Ftri8G26217 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 78,803.90 Da | 40.21 | 94.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 41 | 311 | 9.16742E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 40 | 308 | 2.9E-53 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 421 | 644 | 2.0E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 308 | 4.99E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 648 | 2.97E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 113 | 1.3E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 463 | 653 | 1.2E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 335 | 5.9E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 460 | 1.5E-17 | - |
| SMART | SM00220 | serkin_6 | 35 | 314 | 1.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 314 | 37.799274 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 654 | 23.622873 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 41 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 159 | 171 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021997011.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 isoform X1 [Helianthus annuus] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SZE1 | Serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0359791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G01892, Ag1G01893, Ag1G01894, Ag1G01896, Ag1G01897 ... |
| Asteraceae | Flaveria trinervia | 8 | Ftri6G13736, Ftri7G15621, Ftri8G01115, Ftri8G26217 ... |