Basic Information
Locus ID:
Ftri8G24999
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2175047 | 2176962 | + | Ftri8G24999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 42,040.00 Da | 46.03 | 90.91 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 60 | 3.1E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 266 | 374 | 1.2E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 265 | 374 | 1.31E-17 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 180 | 2.58E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 78 | 181 | 3.8E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 77 | 7.0E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 374 | 1.8E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 262 | 374 | 10.831604 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043623521.1 | probable inactive receptor kinase At2g26730 [Erigeron canadensis] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LPS6 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_40848 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri8G07943, Ftri8G19441, Ftri8G24999 |