Basic Information
Locus ID:
Ftri8G21477
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 71388629 | 71392328 | + | Ftri8G21477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 85,163.02 Da | 33.49 | 108.12 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 683 | 759 | 1.5E-10 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 60 | 6.6E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 259 | 317 | 3.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 473 | 532 | 1.2E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 234 | 256 | 0.057 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 763 | 2.42E-20 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 68 | 390 | 1.49E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 353 | 608 | 1.87E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 648 | 751 | 1.8E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 299 | 8.4E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 621 | 1.4E-85 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 471 | 495 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 279 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 543 | 567 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 280 | 303 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 328 | 352 | 85.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 768 | 13.22025 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 283 | 296 | 9.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 543 | 556 | 9.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_023765825.2 | receptor protein kinase CLAVATA1 [Lactuca sativa] | 0 |
| G7JIK2 | Leucine-rich repeat receptor-like kinase protein SUNN OS=Medicago truncatula OX=3880 GN=SUNN PE=1 SV=2 | 0 | |
| TrEMBL | A0A2J6L9E2 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_8X30001 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_22125, gene_22126 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011420 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41641, Sgl46440 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011472 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0003080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049220 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G21477 |
| Casuarinaceae | Casuarina equisetifolia | 4 | Ceq01G0192, Ceq01G0193, Ceq01G0196, Ceq03G0864 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl01G0214, Cgl01G0215, Cgl03G0944 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1770, evm.TU.LG14.985 |