Basic Information
Locus ID:
Ftri8G21134
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 69074328 | 69076411 | + | Ftri8G21134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 54,025.04 Da | 41.89 | 95.56 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 67 | 459 | 1.6E-160 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 80 | 438 | 3.09E-139 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 73 | 458 | 1.5E-165 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 12 | 465 | 8.6E-207 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 94 | 114 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09880.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes B' regulatory subunit of PP2A (AtB'beta). | 0 |
| RefSeq | XP_023764687.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform [Lactuca sativa] | 0 |
| O04376 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana OX=3702 GN=B'BETA PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LMW6 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Mikania micrantha OX=192012 GN=E3N88_39725 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology