Basic Information
Locus ID:
Ftri8G19441
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1974214 | 1976518 | + | Ftri8G19441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 50,293.92 Da | 38.87 | 84.25 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 143 | 335 | 3.3E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 143 | 413 | 1.02E-53 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 37 | 1.3E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 215 | 425 | 3.2E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 214 | 2.5E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 139 | 409 | 28.004414 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 452 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043623521.1 | probable inactive receptor kinase At2g26730 [Erigeron canadensis] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LPS6 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_40848 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri8G07943, Ftri8G19441, Ftri8G24999 |