Basic Information
Locus ID:
Ftri8G15597
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
TMV resistance protein N-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 76790305 | 76792943 | + | Ftri8G15597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 78,589.24 Da | 34.54 | 91.05 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 244 | 498 | 1.8E-42 | IPR001245 |
| Pfam | PF01582 | TIR domain | 514 | 673 | 3.7E-26 | IPR000157 |
| Pfam | PF01582 | TIR domain | 28 | 169 | 1.1E-28 | IPR000157 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 223 | 502 | 4.72E-65 | IPR011009 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 510 | 644 | 6.28E-22 | IPR035897 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 19 | 164 | 1.02E-30 | IPR035897 |
| Gene3D | G3DSA:3.40.50.10140 | - | 22 | 190 | 4.5E-51 | IPR035897 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 212 | 315 | 4.6E-30 | - |
| Gene3D | G3DSA:3.40.50.10140 | - | 514 | 677 | 2.0E-41 | IPR035897 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 317 | 513 | 1.6E-49 | - |
| SMART | SM00220 | serkin_6 | 240 | 506 | 1.4E-23 | IPR000719 |
| SMART | SM00255 | till_3 | 513 | 645 | 8.4E-16 | IPR000157 |
| SMART | SM00255 | till_3 | 27 | 161 | 3.4E-29 | IPR000157 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 26 | 189 | 26.481945 | IPR000157 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 503 | 33.446003 | IPR000719 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 512 | 671 | 19.026907 | IPR000157 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 359 | 371 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_035836719.1 | disease resistance protein RPS4 [Helianthus annuus] | 0 |
| Q3E8W4 | Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana OX=3702 GN=ANX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1P8H3 | Toll/interleukin-1 receptor (TIR) domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA181900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 8 | Ftri1G03248, Ftri1G09039, Ftri1G17660, Ftri1G29281 ... |