Basic Information
Locus ID:
Ftri8G12102
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 7277482 | 7279766 | - | Ftri8G12102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 31,912.84 Da | 44.43 | 71.65 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 42 | 279 | 1.8E-83 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 166 | 269 | 2.5E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 166 | 281 | 1.8E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 170 | 270 | 23.927704 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 32 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_024979641.1 | auxin-responsive protein IAA27-like [Cynara cardunculus var. scolymus] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6L8Y7 | Auxin-responsive protein OS=Mikania micrantha OX=192012 GN=E3N88_45701 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology