Basic Information
Locus ID:
Ftri8G11220
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 62540080 | 62540370 | - | Ftri8G11220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 11,174.59 Da | 41.61 | 81.15 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 19 | 89 | 6.6E-12 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 13 | 96 | 5.18E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 3 | 96 | 6.8E-22 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 17 | 96 | 12.378525 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_024990512.1 | small ubiquitin-related modifier 2-like [Cynara cardunculus var. scolymus] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RSX7 | Putative ubiquitin-related domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0560801 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology