Basic Information
Locus ID:
Ftri8G10558
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WD repeat domain phosphoinositide-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 61974974 | 61980512 | - | Ftri8G10558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 33,651.70 Da | 38.62 | 104.34 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 238 | 263 | 0.028 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 21 | 273 | 2.75E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 16 | 279 | 2.2E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 180 | 220 | 0.54 | IPR001680 |
| SMART | SM00320 | WD40_4 | 8 | 46 | 25.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 98 | 133 | 400.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 223 | 264 | 0.6 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56440.3 | - | 0 |
| RefSeq | XP_022038080.1 | autophagy-related protein 18d isoform X2 [Helianthus annuus] | 0 |
| Q0WPK3 | Autophagy-related protein 18d OS=Arabidopsis thaliana OX=3702 GN=ATG18D PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6LL52 | WD_REPEATS_REGION domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_39844 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology