Basic Information
Locus ID:
Ftri8G09172
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 77587809 | 77589937 | + | Ftri8G09172 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 41,972.64 Da | 49.34 | 75.14 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 318 | 357 | 7.4E-8 | IPR002893 |
| SUPERFAMILY | SSF81901 | HCP-like | 114 | 231 | 8.5E-13 | - |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 313 | 359 | 8.2E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 40 | 117 | 7.46E-7 | IPR036047 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 105 | 246 | 3.7E-18 | IPR011990 |
| Gene3D | G3DSA:6.10.140.2220 | - | 305 | 360 | 2.4E-10 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 315 | 357 | 10.997721 | IPR002893 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_021998103.1 | F-box protein At1g67340 [Helianthus annuus] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251T4B3 | Putative F-box domain, Zinc finger, MYND-type, Tetratricopeptide-like helical domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0372451 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology