Basic Information
Locus ID:
Ftri8G07943
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2102165 | 2103894 | + | Ftri8G07943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 45,013.19 Da | 39.52 | 87.78 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 60 | 1.4E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 220 | 384 | 1.1E-25 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 108 | 1.51E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 158 | 387 | 1.34E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 198 | 394 | 2.3E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 114 | 7.1E-17 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 392 | 21.361433 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 129 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021996667.1 | probable inactive receptor kinase At2g26730 [Helianthus annuus] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LPS6 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_40848 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 3 | Ftri8G07943, Ftri8G19441, Ftri8G24999 |