Basic Information
Locus ID:
Ftri8G07818
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 74680715 | 74688046 | - | Ftri8G07818 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 168,349.98 Da | 52.27 | 77.26 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1219 | 1481 | 1.64781E-145 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 264 | 530 | 1.19852E-128 | - |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 267 | 527 | 7.1E-33 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1258 | 1423 | 4.9E-35 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 324 | 496 | 2.62E-38 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1211 | 1481 | 1.11E-81 | - |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 278 | 516 | 6.71E-5 | IPR027410 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1180 | 1339 | 7.4E-39 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 323 | 496 | 4.9E-50 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1340 | 1482 | 9.9E-42 | - |
| SMART | SM00330 | PIPK_2 | 1195 | 1482 | 1.2E-123 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1161 | 1481 | 59.227306 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 58 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021990383.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Helianthus annuus] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A251TSY9 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0317221 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology