Basic Information
Locus ID:
Ftri8G07405
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 785587 | 786582 | - | Ftri8G07405 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 32,601.15 Da | 31.50 | 97.40 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 20 | 282 | 2.6E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 283 | 6.55E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 289 | 1.3E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 98 | 2.5E-13 | - |
| PIRSF | PIRSF000654 | ILK | 9 | 289 | 3.2E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 286 | 27.015034 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39000.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_023744339.1 | uncharacterized protein LOC111892523 [Lactuca sativa] | 0 |
| Q9FID8 | Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2J6JSA1 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_5X142161 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 2 | Ftri8G07038, Ftri8G07405 |