Basic Information
Locus ID:
Ftri8G04757
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2906513 | 2910073 | + | Ftri8G04757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 66,295.96 Da | 47.28 | 107.71 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 193 | 216 | 0.0098 | IPR001611 |
| Pfam | PF00646 | F-box domain | 55 | 95 | 0.0011 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 536 | 556 | 0.019 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 454 | 475 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 51 | 93 | 3.92E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 280 | 615 | 1.12E-29 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 143 | 328 | 1.94E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 424 | 618 | 8.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 231 | 1.7E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 423 | 3.7E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 534 | 558 | 4.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 454 | 479 | 2.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 193 | 218 | 3.9E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 141 | 166 | 640.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 508 | 533 | 4.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 351 | 376 | 160.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 377 | 402 | 55.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 428 | 453 | 80.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 219 | 244 | 1.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 481 | 506 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 167 | 192 | 1.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 245 | 270 | 3.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 586 | 611 | 430.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 325 | 350 | 0.071 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_021996686.1 | EIN3-binding F-box protein 2 isoform X1 [Helianthus annuus] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SYE4 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0356231 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology