Basic Information
Locus ID:
Ftri8G03320
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3557739 | 3562584 | + | Ftri8G03320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 41,238.27 Da | 36.69 | 91.69 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 42 | 310 | 5.25686E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 41 | 312 | 1.0E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 310 | 2.29E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 117 | 331 | 6.9E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 116 | 1.5E-32 | - |
| SMART | SM00220 | serkin_6 | 36 | 316 | 1.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 316 | 37.573132 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 163 | 175 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 69 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38990.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_043617608.1 | probable receptor-like protein kinase At1g30570 [Erigeron canadensis] | 0 |
| Q9FID9 | Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana OX=3702 GN=At5g38990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2U1Q2M3 | Serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA081580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 9 | Ftri14G05518, Ftri14G19961, Ftri7G00942, Ftri7G02286 ... |