Basic Information
Locus ID:
Ftri8G02100
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 4153941 | 4159112 | + | Ftri8G02100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 69,283.60 Da | 35.82 | 98.61 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 5.1E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 180 | 1.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 300 | 566 | 7.6E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 194 | 3.23E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 569 | 2.46E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 211 | 3.8E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 585 | 5.3E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 270 | 375 | 9.5E-34 | - |
| SMART | SM00220 | serkin_6 | 299 | 568 | 4.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 584 | 36.018391 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 143 | 7.488635 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 122 | 135 | 1.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 167 | 180 | 1.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_035836644.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Helianthus annuus] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251T041 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0357971 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology