HalophFGD

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Basic Information
Locus ID: Ftri8G00988
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: FAR1 DNA-binding domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr8 21816738 21818217 + Ftri8G00988
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.27 44,608.09 Da 39.97 77.59 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SMART SM00575 26again6 181 208 0.001 IPR006564
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 170 206 10.101061 IPR007527
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G38180.1 FAR1-related sequence 5. 0
RefSeq XP_021998170.1 protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] 0
Swiss-Prot Q9SZL8 Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 0
TrEMBL A0A5N6N8P3 Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_21822 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.