Basic Information
Locus ID:
Ftri8G00461
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
FAR1 DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 64209044 | 64212822 | + | Ftri8G00461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 31,404.30 Da | 43.47 | 70.86 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | SM00575 | 26again6 | 188 | 215 | 0.0083 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 177 | 213 | 9.68062 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 56 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022024555.1 | protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] | 0 |
| TrEMBL | A0A5N6N0F4 | Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_28358 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 44 | Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ... |