Basic Information
Locus ID:
Ftri7G33843
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 10668196 | 10671285 | - | Ftri7G33843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 55,995.73 Da | 28.31 | 77.77 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15898 | EFh_PI-PLC | 361 | 494 | 5.42896E-14 | - |
| CDD | cd00051 | EFh | 432 | 493 | 1.93773E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 46 | 313 | 4.5875E-116 | - |
| Pfam | PF00069 | Protein kinase domain | 47 | 314 | 1.5E-70 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 358 | 421 | 1.8E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 492 | 7.3E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 353 | 492 | 2.8E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 324 | 7.55E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 48 | 131 | 2.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 321 | 2.6E-53 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 494 | 1.5E-50 | - |
| SMART | SM00054 | efh_1 | 360 | 388 | 8.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 467 | 494 | 0.21 | IPR002048 |
| SMART | SM00054 | efh_1 | 432 | 460 | 5.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.0017 | IPR002048 |
| SMART | SM00220 | serkin_6 | 46 | 314 | 2.5E-90 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 12.895472 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 11.02648 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 494 | 9.63171 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 15.685013 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 314 | 47.537601 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 476 | 488 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 369 | 381 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 405 | 417 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 75 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04720.1 | calcium-dependent protein kinase 21. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_024960205.1 | calcium-dependent protein kinase 9-like [Cynara cardunculus var. scolymus] | 0 |
| Q9ZSA2 | Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana OX=3702 GN=CPK21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6LCQ6 | Calcium/calmodulin-dependent protein kinase OS=Lactuca sativa OX=4236 GN=LSAT_9X94340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Ftri7G33843.