Basic Information
Locus ID:
Ftri7G26970
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6376934 | 6380439 | + | Ftri7G26970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 84,663.86 Da | 40.04 | 85.70 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 28 | 297 | 1.4E-40 | IPR001245 |
| Pfam | PF14299 | Phloem protein 2 | 569 | 737 | 7.9E-16 | IPR025886 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 299 | 6.79E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 315 | 1.4E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 100 | 1.7E-33 | - |
| SMART | SM00220 | serkin_6 | 25 | 300 | 2.4E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 301 | 32.640366 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 144 | 156 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 53 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_021993850.1 | uncharacterized protein LOC110890537 [Helianthus annuus] | 0 |
| Q3E8W4 | Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana OX=3702 GN=ANX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SU75 | Putative serine/threonine-protein kinase, active site protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0412491 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |