Basic Information
Locus ID:
Ftri7G24989
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
EBF2
Description:
EIN3-binding F box protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 61615130 | 61617744 | - | Ftri7G24989 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 66,243.00 Da | 36.32 | 104.19 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 499 | 520 | 0.67 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 195 | 218 | 0.082 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 523 | 545 | 0.29 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 44 | 89 | 1.23E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 353 | 597 | 1.18E-29 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 148 | 385 | 1.44E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 129 | 226 | 3.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 410 | 8.3E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 412 | 608 | 4.2E-31 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 443 | 468 | 0.69 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 143 | 168 | 400.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 3.7E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 311 | 336 | 15.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 363 | 388 | 48.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 523 | 547 | 15.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 549 | 574 | 62.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 417 | 442 | 39.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 232 | 257 | 1.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 337 | 362 | 21.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 283 | 308 | 610.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 470 | 495 | 25.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 169 | 194 | 0.52 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 497 | 522 | 0.89 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 116 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_021981161.1 | EIN3-binding F-box protein 2 [Helianthus annuus] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TRM5 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0242011 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology