Basic Information
Locus ID:
Ftri7G22682
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
PRK1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 7206459 | 7207124 | + | Ftri7G22682 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 24,364.49 Da | 34.26 | 96.61 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 67 | 3.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 2.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 210 | 1.81E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 217 | 4.1E-34 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 221 | - | - |
| Coils | Coil | Coil | 169 | 189 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_023749235.2 | pollen receptor-like kinase 4 [Lactuca sativa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6JGT6 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_5X56441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology