Basic Information
Locus ID:
Ftri7G16845
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6519179 | 6523896 | + | Ftri7G16845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 58,330.05 Da | 37.45 | 88.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 29 | 298 | 7.6E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 311 | 4.18E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 322 | 3.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 103 | 1.7E-29 | - |
| SMART | SM00220 | serkin_6 | 25 | 306 | 1.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 314 | 33.926559 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 56 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39000.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_021993850.1 | uncharacterized protein LOC110890537 [Helianthus annuus] | 0 |
| Q9FID8 | Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana OX=3702 GN=At5g39000 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251SU75 | Putative serine/threonine-protein kinase, active site protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0412491 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |