Basic Information
Locus ID:
Ftri7G15466
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6442189 | 6476635 | + | Ftri7G15466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 143,768.16 Da | 38.37 | 84.08 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 606 | 864 | 1.1E-35 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 26 | 241 | 6.4E-40 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 318 | 588 | 8.6E-41 | IPR001245 |
| Pfam | PF14299 | Phloem protein 2 | 1103 | 1250 | 6.8E-16 | IPR025886 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 593 | 864 | 9.97E-59 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 304 | 590 | 1.05E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 299 | 1.24E-63 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 392 | 4.6E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 103 | 7.9E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 105 | 300 | 8.6E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 593 | 680 | 1.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 592 | 6.4E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 682 | 886 | 5.8E-41 | - |
| SMART | SM00220 | serkin_6 | 602 | 872 | 1.0E-23 | IPR000719 |
| SMART | SM00220 | serkin_6 | 25 | 294 | 2.2E-24 | IPR000719 |
| SMART | SM00220 | serkin_6 | 314 | 596 | 2.7E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 314 | 592 | 33.940693 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 302 | 32.089142 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 868 | 25.841911 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 320 | 345 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 436 | 448 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 56 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| Coils | Coil | Coil | 581 | 605 | - | - |
| Coils | Coil | Coil | 283 | 303 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_022012748.1 | uncharacterized protein LOC110912357 isoform X1 [Helianthus annuus] | 0 |
| Q3E8W4 | Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana OX=3702 GN=ANX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SUR2 | Putative fibroblast growth factor receptor family, Phloem protein 2-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0414981 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |