Basic Information
Locus ID:
Ftri7G15215
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 11890677 | 11895077 | + | Ftri7G15215 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 89,382.86 Da | 40.11 | 83.49 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 331 | 382 | 2.2E-8 | IPR018289 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 113 | 205 | 1.6E-10 | IPR004330 |
| SMART | SM00575 | 26again6 | 586 | 613 | 7.6E-4 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 575 | 611 | 9.668254 | IPR007527 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06250.1 | FAR1-related sequence 7. | 0 |
| RefSeq | XP_022032002.1 | protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] | 0 |
| Q9M8J3 | Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6PZ54 | Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_00539 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 44 | Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ... |