Basic Information
Locus ID:
Ftri7G08977
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 6310704 | 6319406 | + | Ftri7G08977 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 114,531.85 Da | 46.62 | 76.00 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 549 | 616 | 9.43727E-22 | - |
| Pfam | PF01426 | BAH domain | 294 | 397 | 1.5E-10 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 628 | 986 | 8.0E-35 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 441 | 987 | 2.27E-74 | IPR029063 |
| Gene3D | G3DSA:2.30.30.490 | - | 220 | 384 | 2.3E-42 | IPR043151 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 432 | 526 | 1.1E-12 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 779 | 953 | 4.1E-208 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 587 | 1004 | 4.1E-208 | - |
| SMART | SM00439 | BAH_4 | 283 | 399 | 4.4E-21 | IPR001025 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 628 | 983 | 2.7E-29 | IPR001525 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 441 | 994 | 45.883442 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 283 | 399 | 18.011051 | IPR001025 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 631 | 643 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 442 | 458 | 3.9E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 720 | 733 | 3.9E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 674 | 688 | 3.9E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_035838392.1 | DNA (cytosine-5)-methyltransferase CMT2-like [Helianthus annuus] | 0 |
| Q94F87 | DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5N6PH74 | Cytosine-specific methyltransferase OS=Mikania micrantha OX=192012 GN=E3N88_08453 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology