Basic Information
Locus ID:
Ftri7G06025
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 5897079 | 5903001 | + | Ftri7G06025 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 102,120.11 Da | 47.30 | 53.00 | -1.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 26 | 264 | 1.34E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 723 | 764 | 5.19E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 722 | 770 | 1.4E-10 | - |
| SMART | SM00333 | TUDOR_7 | 721 | 780 | 0.0093 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 721 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 811 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 877 | 907 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 944 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 683 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 859 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 908 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 860 | 876 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 566 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 628 | - | - |
| Coils | Coil | Coil | 397 | 417 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_022001978.1 | nucleolin [Helianthus annuus] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A251SUB4 | Putative tudor domain, Armadillo-type fold protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0413351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology