Basic Information
Locus ID:
Ftri7G01165
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 585417 | 591861 | - | Ftri7G01165 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 98,653.57 Da | 55.26 | 86.43 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 44 | 197 | 1.94407E-44 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 814 | 855 | 1.29112E-23 | - |
| Pfam | PF04564 | U-box domain | 810 | 879 | 2.6E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 531 | 779 | 7.5E-43 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 804 | 879 | 2.03E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 505 | 788 | 3.24E-65 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 38 | 161 | 3.2E-7 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 807 | 880 | 1.9E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 599 | 794 | 3.9E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 511 | 598 | 5.2E-26 | - |
| SMART | SM00220 | serkin_6 | 526 | 791 | 2.9E-33 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 813 | 876 | 5.8E-27 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 792 | 33.728683 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 809 | 880 | 34.296543 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 641 | 653 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 532 | 553 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 237 | - | - |
| Coils | Coil | Coil | 352 | 498 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_022002962.1 | U-box domain-containing protein 33 isoform X1 [Helianthus annuus] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251SYY6 | Putative U-box domain-containing protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0426571 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology