Basic Information
Locus ID:
Ftri6G28686
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 69578294 | 69582047 | - | Ftri6G28686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 72,179.46 Da | 41.86 | 96.06 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 220 | 488 | 2.0E-91 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 125 | 6.83E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 146 | 1.6E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 220 | 512 | 87.489456 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 30 | 108 | 10.095861 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 617 | 637 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 637 | - | - |
| Coils | Coil | Coil | 559 | 586 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_024994550.1 | BTB/POZ domain-containing protein At5g03250-like [Cynara cardunculus var. scolymus] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2U1N0R0 | SKP1/BTB/POZ domain, NPH3 domain protein OS=Artemisia annua OX=35608 GN=CTI12_AA320210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology