Basic Information
Locus ID:
Ftri6G27302
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 40057153 | 40062296 | + | Ftri6G27302 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 63,324.73 Da | 52.51 | 71.38 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 231 | 3.27765E-116 | - |
| Pfam | PF00069 | Protein kinase domain | 2 | 230 | 2.2E-54 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 267 | 2.16E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 56 | 5.8E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 57 | 247 | 3.8E-55 | - |
| SMART | SM00220 | serkin_6 | 1 | 231 | 3.1E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 231 | 39.848705 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 98 | 110 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 378 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54510.1 | NIMA-related serine/threonine kinase 1. Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_022011182.1 | serine/threonine-protein kinase Nek2 [Helianthus annuus] | 0 |
| Q9SLI2 | Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251S6C1 | Putative mitogen-activated protein (MAP) kinase, ERK3/4 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0471651 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology