HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ftri6G20582
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: F-Box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 70862871 70863904 + Ftri6G20582
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.36 38,037.66 Da 41.70 84.76 -0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 2 110 2.4E-7 IPR036047
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 78 254 1.2E-11 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_022008024.1 F-box protein At3g08750-like [Helianthus annuus] 0
TrEMBL A0A251RW44 Putative F-box domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0568931 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 1 AsparagusV1_04.850.V1.1
Asteraceae Flaveria trinervia 25 Ftri10G02265, Ftri10G33221, Ftri11G12082, Ftri11G33565 ...
Ftri12G27612, Ftri12G29141, Ftri16G04664, Ftri16G13241, Ftri16G29382, Ftri1G21041, Ftri2G34093, Ftri3G14959, Ftri3G18031, Ftri4G03317, Ftri4G21166, Ftri4G31008, Ftri4G32713, Ftri5G21974, Ftri6G20582, Ftri7G11045, Ftri7G23034, FtriNA02227, FtriNA07995, FtriNA13567, FtriNA25090
Poaceae Lolium multiflorum 1 gene-QYE76_020523
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.