Basic Information
Locus ID:
Ftri6G15947
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 67406309 | 67408657 | + | Ftri6G15947 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 37,465.42 Da | 42.69 | 55.14 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 178 | 261 | 1.7E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 291 | - | - |
| Coils | Coil | Coil | 191 | 221 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021973311.1 | protein WVD2-like 4 [Helianthus annuus] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6P9I7 | TPX2 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_13201 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology