Basic Information
Locus ID:
Ftri6G15673
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 64731309 | 64732290 | - | Ftri6G15673 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 20,137.39 Da | 40.46 | 88.59 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 73 | 101 | 1.8E-6 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 68 | 140 | 1.55E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 166 | 3.2E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 73 | 128 | 10.128798 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 92 | 101 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_023771407.1 | uncharacterized protein LOC111920064 [Lactuca sativa] | 0 |
| TrEMBL | A0A5N6P5S6 | RING-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_12530 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology