Basic Information
Locus ID:
Ftri6G13736
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30414328 | 30417296 | - | Ftri6G13736 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 72,569.77 Da | 36.48 | 91.62 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 130 | 401 | 8.89315E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 519 | 612 | 8.6E-11 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 126 | 397 | 8.9E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 494 | 650 | 8.5E-28 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 403 | 5.8E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 607 | 654 | 4.9E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 109 | 200 | 2.6E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 201 | 424 | 1.4E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 485 | 599 | 3.5E-17 | - |
| SMART | SM00220 | serkin_6 | 124 | 403 | 1.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 404 | 31.59445 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 514 | 656 | 11.707912 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 251 | 263 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 520 | 552 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 153 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28680.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_021985598.2 | uncharacterized protein LOC110881738 [Helianthus annuus] | 0 |
| Q3E8W4 | Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana OX=3702 GN=ANX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TJ13 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0295131 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G01892, Ag1G01893, Ag1G01894, Ag1G01896, Ag1G01897 ... |
| Asteraceae | Flaveria trinervia | 8 | Ftri6G13736, Ftri7G15621, Ftri8G01115, Ftri8G26217 ... |