HalophFGD

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Basic Information
Locus ID: Ftri6G11251
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: F-box LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 56347694 56351308 - Ftri6G11251
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.26 57,039.94 Da 40.95 106.00 -0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 2 59 2.78E-6 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 3 317 6.1E-7 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021997485.1 F-box/LRR-repeat protein At4g14096 isoform X2 [Helianthus annuus] 0
TrEMBL A0A251T0U9 Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0365501 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg16990, jg16992, jg27968, jg9476
Aizoaceae Mesembryanthemum crystallinum 6 gene_17890, gene_23843, gene_23845, gene_26069, gene_26076 ...
gene_8928
Amaranthaceae Atriplex hortensis 15 Ah003492, Ah003713, Ah007308, Ah011333, Ah011344, Ah011345 ...
Ah011352, Ah017555, Ah022045, Ah028504, Ah033039, Ah033040, Ah033075, Ah035474, Ah038475
Amaranthaceae Beta vulgaris 5 BVRB_2g026890, BVRB_9g204170, BVRB_9g211600, BVRB_9g211710 ...
BVRB_9g211720
Amaranthaceae Salicornia bigelovii 6 Sbi_jg12067, Sbi_jg12074, Sbi_jg21899, Sbi_jg46991 ...
Sbi_jg46997, Sbi_jg46998
Amaranthaceae Salicornia europaea 4 Seu_jg15849, Seu_jg20904, Seu_jg21273, Seu_jg21278
Amaranthaceae Suaeda aralocaspica 9 GOSA_00008468, GOSA_00009619, GOSA_00009624, GOSA_00009625 ...
GOSA_00009626, GOSA_00009627, GOSA_00024068, GOSA_00024069, GOSA_00028233
Amaranthaceae Suaeda glauca 24 Sgl21428, Sgl53024, Sgl58299, Sgl63149, Sgl63284, Sgl63728 ...
Sgl63738, Sgl63739, Sgl63740, Sgl67763, Sgl68229, Sgl68230, Sgl68232, Sgl80475, Sgl80479, Sgl80481, Sgl80483, Sgl80484, Sgl82932, Sgl82936, Sgl82937, Sgl82939, Sgl82941, Sgl82942
Amaranthaceae Chenopodium album 15 gene:ENSEOMG00000009238, gene:ENSEOMG00000015328 ...
gene:ENSEOMG00000015409, gene:ENSEOMG00000016908, gene:ENSEOMG00000016955, gene:ENSEOMG00000018236, gene:ENSEOMG00000019663, gene:ENSEOMG00000020668, gene:ENSEOMG00000042248, gene:ENSEOMG00000050047, gene:ENSEOMG00000050424, gene:ENSEOMG00000050635, gene:ENSEOMG00000051975, gene:ENSEOMG00000052346, gene:ENSEOMG00000053019
Amaranthaceae Chenopodium quinoa 15 CQ.Regalona.r1.2AG0010070, CQ.Regalona.r1.2AG0019370 ...
CQ.Regalona.r1.2BG0008820, CQ.Regalona.r1.2BG0011640, CQ.Regalona.r1.2BG0011700, CQ.Regalona.r1.2BG0021080, CQ.Regalona.r1.2BG0021090, CQ.Regalona.r1.2BG0021100, CQ.Regalona.r1.2BG0021110, CQ.Regalona.r1.9AG0011500, CQ.Regalona.r1.9BG0010960, CQ.Regalona.r1.9BG0010980, CQ.Regalona.r1.9BG0011000, CQ.Regalona.r1.9BG0021180, CQ.Regalona.r1.9BG0021200
Anacardiaceae Pistacia vera 7 pistato.v30081860, pistato.v30081870, pistato.v30081880 ...
pistato.v30081890, pistato.v30164750, pistato.v30209840, pistato.v30283190
Apiaceae Apium graveolens 1 Ag1G00384
Asteraceae Flaveria trinervia 3 Ftri13G25356, Ftri18G18017, Ftri6G11251
Casuarinaceae Casuarina equisetifolia 1 Ceq02G0902
Casuarinaceae Casuarina glauca 1 Cgl02G0915
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-788
Nitrariaceae Nitraria sibirica 16 evm.TU.LG01.1927, evm.TU.LG01.305, evm.TU.LG01.327 ...
evm.TU.LG01.356, evm.TU.LG01.683, evm.TU.LG01.726, evm.TU.LG01.727, evm.TU.LG01.728, evm.TU.LG02.2125, evm.TU.LG04.1935, evm.TU.LG04.1937, evm.TU.LG04.2275, evm.TU.LG05.375, evm.TU.LG05.378, evm.TU.LG06.972, evm.TU.LG06.974
Plantaginaceae Plantago ovata 4 Pov_00014477, Pov_00020690, Pov_00032420, Pov_00036996
Poaceae Lolium multiflorum 1 gene-QYE76_068143
Portulacaceae Portulaca oleracea 7 evm.TU.LG04.3334, evm.TU.LG04.3336, evm.TU.LG04.3338 ...
evm.TU.LG16.260, evm.TU.LG16.261, evm.TU.LG16.262, evm.TU.LG16.263
Rhizophoraceae Bruguiera sexangula 9 evm.TU.58473.3, evm.TU.58474.3 ...
evm.TU.Scaffold_10_RagTag.1290, evm.TU.Scaffold_10_RagTag.1331, evm.TU.Scaffold_10_RagTag.1332, evm.TU.Scaffold_10_RagTag.1333, evm.TU.Scaffold_10_RagTag.1336, evm.TU.Scaffold_18_RagTag.532, evm.TU.Scaffold_18_RagTag.533
Rhizophoraceae Carallia pectinifolia 19 nbisL1-mrna-27616, nbisL1-mrna-27618, nbisL1-mrna-27622 ...
nbisL1-mrna-27625, nbisL1-mrna-27697, nbisL1-mrna-27702, nbisL1-mrna-27704, nbisL1-mrna-27905, nbisL1-mrna-27907, nbisL1-mrna-27909, nbisL1-mrna-27985, nbisL1-mrna-27987, nbisL1-mrna-27988, nbisL1-mrna-7005, nbisL1-mrna-7058, nbisL1-mrna-7059, nbisL1-mrna-7060, nbisL1-mrna-7061, nbisL1-mrna-7065
Rhizophoraceae Ceriops tagal 6 nbisL1-mrna-10287, nbisL1-mrna-12046, nbisL1-mrna-18898 ...
nbisL1-mrna-18899, nbisL1-mrna-8061, nbisL1-mrna-8062
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-11052, nbisL1-mrna-7949, nbisL1-mrna-8010 ...
nbisL1-mrna-8788, nbisL1-mrna-8789, nbisL1-mrna-8837
Rhizophoraceae Kandelia candel 6 add.evm.TU.utg000023l.32, evm.TU.utg000004l.83 ...
evm.TU.utg000006l.823, evm.TU.utg000023l.139, evm.TU.utg000023l.90, evm.TU.utg000033l.565
Rhizophoraceae Kandelia obovata 2 Maker00014848, Maker00018808
Rhizophoraceae Rhizophora apiculata 6 nbisL1-mrna-16397, nbisL1-mrna-16436, nbisL1-mrna-19692 ...
nbisL1-mrna-20832, nbisL1-mrna-23431, nbisL1-mrna-7349
Rhizophoraceae Rhizophora mangle 6 nbisL1-mrna-17932, nbisL1-mrna-17935, nbisL1-mrna-17988 ...
nbisL1-mrna-21301, nbisL1-mrna-21303, nbisL1-mrna-21364
Salicaceae Populus euphratica 8 populus_peu00619, populus_peu16916, populus_peu24661 ...
populus_peu24662, populus_peu24664, populus_peu24675, populus_peu24676, populus_peu30273
Solanaceae Lycium barbarum 21 gene-LOC132601784, gene-LOC132601790, gene-LOC132610625 ...
gene-LOC132611099, gene-LOC132611566, gene-LOC132611567, gene-LOC132611651, gene-LOC132611738, gene-LOC132615103, gene-LOC132616224, gene-LOC132618779, gene-LOC132619204, gene-LOC132619293, gene-LOC132619703, gene-LOC132628759, gene-LOC132631532, gene-LOC132633437, gene-LOC132633439, gene-LOC132637401, gene-LOC132638367, gene-LOC132642006
Solanaceae Solanum chilense 9 SOLCI001031400, SOLCI001031500, SOLCI003560900 ...
SOLCI003561100, SOLCI003839000, SOLCI004517500, SOLCI005665000, SOLCI006910300, SOLCI007377100
Solanaceae Solanum pennellii 13 gene-LOC107003547, gene-LOC107014443, gene-LOC107022870 ...
gene-LOC107024245, gene-LOC107029760, gene-LOC107029892, gene-LOC107030419, gene-LOC107030421, gene-LOC107030424, gene-LOC114073980, gene-LOC114073981, gene-LOC114074087, gene-LOC114078590
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.